EnhancerDB
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Enhancers that have rs2002391[chr19:4813799]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 4796225 4815632 enh17875
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Pancreas (Panc1) Muscle (Myoblast) Pancreas Spleen Uterus Heart
Transcript factors that have rs2002391[chr19:4813799]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 4812389 4813902 TCF7L2 GTRD no Colon (HCT116) 21842295
chr19 4812389 4813902 TCF7L2 GTRD no Colon (HCT116) 108373066
chr19 4812426 4813847 ZBTB33 GTRD no Lung (A549) 108373069
chr19 4812435 4813800 ZNF274 GTRD no Cervix (HeLa-S3) 21842300
chr19 4812435 4813800 ZNF274 GTRD no Cervix (HeLa-S3) 108373072
chr19 4812482 4813846 ZNF274 GTRD no Blood (GM12878) 108373074
chr19 4812548 4813837 ZBTB33 GTRD no Brain (SK-N-SH) 108373086
chr19 4812585 4813838 ZBTB33 GTRD no Lung (A549) 108373093
chr19 4812616 4813816 ZBTB33 GTRD no Lung (A549) 108373099
chr19 4812619 4813850 ZNF274 GTRD no Blood (GM12878) 108373100
chr19 4812731 4813842 ZNF274 GTRD no Blood (GM12878) 108373129
chr19 4813786 4813803 ESR1 JASPAR yes 112192784
chr19 4813789 4813810 ZNF263 JASPAR yes 112192785
Genes associated with rs2002391[chr19:4813799], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More