EnhancerDB
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  3. rs200401560[chr12:47698443]
Enhancers that have rs200401560[chr12:47698443]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 47684745 47715015 enh2317
Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Blood (OCI-LY7) Blood (GM12878) Stomach Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs200401560[chr12:47698443]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 47697784 47698486 ZNF274 GTRD no Blood (GM12878) 21543272
chr12 47698428 47698444 POU4F2 JASPAR yes 120694686
chr12 47698428 47698444 POU4F3 JASPAR yes 120694687
chr12 47698430 47698444 POU4F1 JASPAR yes 120694689
chr12 47698430 47698445 HNF1A JASPAR yes 120694690
chr12 47698431 47698443 FOXC2 JASPAR yes 120694691
chr12 47698431 47698444 HNF1B JASPAR yes 120694692
chr12 47698431 47698445 ONECUT3 JASPAR yes 120694693
chr12 47698431 47698445 POU4F1 JASPAR yes 120694694
chr12 47698431 47698447 POU4F3 JASPAR yes 120694695
chr12 47698435 47698449 ONECUT3 JASPAR yes 120694697
chr12 47698435 47698451 POU4F2 JASPAR yes 120694698
chr12 47698435 47698451 POU4F3 JASPAR yes 120694699
chr12 47698436 47698446 PAX3 JASPAR yes 120694700
chr12 47698436 47698446 PAX7 JASPAR yes 120694701
chr12 47698437 47698451 POU4F1 JASPAR yes 120694702
chr12 47698437 47698452 HNF1A JASPAR yes 120694703
chr12 47698438 47698448 LHX6 JASPAR yes 120694704
chr12 47698438 47698448 MNX1 JASPAR yes 120694705
chr12 47698438 47698448 POU6F1 JASPAR yes 120694706
chr12 47698438 47698451 HNF1B JASPAR yes 120694707
chr12 47698439 47698447 LMX1A JASPAR yes 120694708
chr12 47698439 47698447 LMX1B JASPAR yes 120694709
chr12 47698439 47698447 NKX6-1 JASPAR yes 120694710
chr12 47698439 47698447 NKX6-2 JASPAR yes 120694711
chr12 47698439 47698447 VAX1 JASPAR yes 120694712
chr12 47698439 47698447 VAX2 JASPAR yes 120694713
chr12 47698439 47698447 VSX1 JASPAR yes 120694714
chr12 47698439 47698447 VSX2 JASPAR yes 120694715
Genes associated with rs200401560[chr12:47698443], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More