EnhancerDB
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  3. rs200412863[chr6:35354970]
Enhancers that have rs200412863[chr6:35354970]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 35351436 35372635 enh23176
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Prostate (RWPE1) Ovary Esophagus Astrocyte Lung (PC-9) Bone (Osteoblast) Stomach Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs200412863[chr6:35354970]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 35354957 35354972 TFAP2A JASPAR yes 101279791
chr6 35354957 35354972 TFAP2C JASPAR yes 101279792
chr6 35354958 35354977 CTCF JASPAR yes 101279793
chr6 35354959 35354972 TFAP2A JASPAR yes 101279794
chr6 35354959 35354972 TFAP2B JASPAR yes 101279795
chr6 35354959 35354972 TFAP2C JASPAR yes 101279796
chr6 35354959 35354973 EBF1 JASPAR yes 101279797
chr6 35354960 35354971 EBF1 JASPAR yes 101279798
Genes associated with rs200412863[chr6:35354970], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More