EnhancerDB
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  3. rs200457892[chr16:5000239]
Enhancers that have rs200457892[chr16:5000239]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4988771 5002255 enh16521
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Heart
Transcript factors that have rs200457892[chr16:5000239]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 5000221 5000242 IRF1 JASPAR yes 9294298
chr16 5000222 5000243 IRF1 JASPAR yes 9294299
chr16 5000224 5000239 FOXP1 JASPAR yes 9294300
chr16 5000226 5000241 FOXP1 JASPAR yes 9294301
chr16 5000227 5000242 FOXP1 JASPAR yes 9294302
chr16 5000227 5000248 IRF1 JASPAR yes 9294303
chr16 5000228 5000243 FOXP1 JASPAR yes 9294304
chr16 5000228 5000243 MEF2C JASPAR yes 9294305
chr16 5000228 5000249 IRF1 JASPAR yes 9294306
chr16 5000230 5000245 FOXP1 JASPAR yes 9294307
chr16 5000234 5000249 FOXP1 JASPAR yes 9294308
chr16 5000235 5000247 FOXC2 JASPAR yes 9294309
chr16 5000237 5000241 YY1 TRANSFAC yes 9294310
Genes associated with rs200457892[chr16:5000239], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More