EnhancerDB
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  3. rs200460588[chr5:172143392]
Enhancers that have rs200460588[chr5:172143392]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 172132305 172146715 enh22814
Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Ovary Blood (T-cell) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Thymus Heart
Transcript factors that have rs200460588[chr5:172143392]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 172143377 172143392 ESR2 JASPAR yes 67817660
chr5 172143385 172143393 NR4A2 JASPAR yes 67817661
chr5 172143386 172143407 REST JASPAR yes 67817662
chr5 172143387 172143406 REST JASPAR yes 67817663
chr5 172143390 172143401 EBF1 JASPAR yes 67817664
Genes associated with rs200460588[chr5:172143392], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More