EnhancerDB
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  3. rs200482603[chr16:1772006]
Enhancers that have rs200482603[chr16:1772006]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 1759265 1774552 enh3842
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs200482603[chr16:1772006]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 1771994 1772007 NR2F1 JASPAR yes 9158790
chr16 1771998 1772008 RORA JASPAR yes 9158791
chr16 1771998 1772015 RARA JASPAR yes 9158792
chr16 1771998 1772015 RXRA JASPAR yes 9158793
Genes associated with rs200482603[chr16:1772006], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More