EnhancerDB
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  3. rs200486427[chr17:78838312]
Enhancers that have rs200486427[chr17:78838312]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78831119 78853255 enh4640
Skin (Keratinocyte) Brain (SK-N-SH) Blood (T-cell) Bone (Osteoblast) Muscle (A673) Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Muscle (Myotube) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs200486427[chr17:78838312]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78838293 78838314 ZNF263 JASPAR yes 56287012
chr17 78838294 78838315 IRF1 JASPAR yes 56287013
chr17 78838298 78838313 PRDM1 JASPAR yes 56287014
chr17 78838300 78838321 IRF1 JASPAR yes 56287015
chr17 78838303 78838317 IRF7 JASPAR yes 56287016
Genes associated with rs200486427[chr17:78838312], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More