EnhancerDB
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  3. rs200529542[chr2:232510701]
Enhancers that have rs200529542[chr2:232510701]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232503025 232517415 enh19322
Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Heart
Transcript factors that have rs200529542[chr2:232510701]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232510680 232510701 IRF1 JASPAR yes 81730833
chr2 232510687 232510702 MEF2C JASPAR yes 81730835
chr2 232510692 232510702 HOXA13 JASPAR yes 81730836
chr2 232510692 232510702 HOXC10 JASPAR yes 81730837
chr2 232510692 232510702 HOXD11 JASPAR yes 81730838
chr2 232510692 232510703 HOXA10 JASPAR yes 81730839
chr2 232510692 232510703 HOXC11 JASPAR yes 81730840
chr2 232510692 232510703 HOXC12 JASPAR yes 81730841
chr2 232510692 232510703 HOXD12 JASPAR yes 81730842
chr2 232510693 232510702 CDX1 JASPAR yes 81730843
chr2 232510693 232510704 CDX2 JASPAR yes 81730844
Genes associated with rs200529542[chr2:232510701], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More