EnhancerDB
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  3. rs2005309[chr8:10652170]
Enhancers that have rs2005309[chr8:10652170]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr8 10644325 10666767 enh24741
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs2005309[chr8:10652170]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr8 10652152 10652170 RARA JASPAR yes 43096009
chr8 10652159 10652172 NR2F1 JASPAR yes 43096010
chr8 10652161 10652172 ESRRA JASPAR yes 43096011
chr8 10652161 10652172 ESRRB JASPAR yes 43096012
chr8 10652162 10652170 NR4A2 JASPAR yes 43096013
chr8 10652163 10652173 RORA JASPAR yes 43096014
Genes associated with rs2005309[chr8:10652170], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More