EnhancerDB
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  3. rs200540525[chr11:61470925]
Enhancers that have rs200540525[chr11:61470925]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 61449565 61471181 enh13960
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs200540525[chr11:61470925]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 61470905 61470925 RREB1 JASPAR yes 39162237
chr11 61470906 61470926 RREB1 JASPAR yes 39162238
chr11 61470907 61470927 RREB1 JASPAR yes 39162239
chr11 61470908 61470929 ZNF263 JASPAR yes 39162241
chr11 61470909 61470929 RREB1 JASPAR yes 39162242
chr11 61470910 61470930 RREB1 JASPAR yes 39162243
chr11 61470911 61470931 RREB1 JASPAR yes 39162245
chr11 61470912 61470932 RREB1 JASPAR yes 39162247
chr11 61470915 61470925 SP1 JASPAR yes 39162249
Genes associated with rs200540525[chr11:61470925], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More