EnhancerDB
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  3. rs200550785[chr18:57617175]
Enhancers that have rs200550785[chr18:57617175]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 57615485 57630775 enh4882
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Lung (A549) Blood (GM12878) Stomach Placenta Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs200550785[chr18:57617175]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 57617162 57617177 MEF2C JASPAR yes 111067156
chr18 57617163 57617184 IRF1 JASPAR yes 111067157
chr18 57617165 57617186 IRF1 JASPAR yes 111067158
chr18 57617169 57617184 FOXP1 JASPAR yes 111067159
chr18 57617169 57617190 IRF1 JASPAR yes 111067160
chr18 57617170 57617185 FOXP1 JASPAR yes 111067161
chr18 57617170 57617191 IRF1 JASPAR yes 111067162
chr18 57617171 57617186 FOXP1 JASPAR yes 111067163
chr18 57617171 57617192 IRF1 JASPAR yes 111067164
chr18 57617172 57617187 FOXP1 JASPAR yes 111067165
chr18 57617172 57617193 IRF1 JASPAR yes 111067166
chr18 57617173 57617188 FOXP1 JASPAR yes 111067167
chr18 57617173 57617194 IRF1 JASPAR yes 111067168
chr18 57617174 57617189 FOXP1 JASPAR yes 111067169
chr18 57617174 57617195 IRF1 JASPAR yes 111067170
chr18 57617175 57617190 FOXP1 JASPAR yes 111067171
Genes associated with rs200550785[chr18:57617175], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More