EnhancerDB
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  3. rs2005542[chr17:76884226]
Enhancers that have rs2005542[chr17:76884226]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76867725 76884335 enh17416
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs2005542[chr17:76884226]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76884221 76884242 IRF1 JASPAR yes 56186366
chr17 76884223 76884238 STAT2 JASPAR yes 56186367
chr17 76884225 76884240 IRF9 JASPAR yes 56186368
Genes associated with rs2005542[chr17:76884226], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More