EnhancerDB
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  3. rs200554977[chr16:11189674]
Enhancers that have rs200554977[chr16:11189674]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 11167765 11210995 enh3882
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs200554977[chr16:11189674]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 11187629 11189693 ZNF274 GTRD no Liver (HepG2) 108180095
chr16 11188458 11189682 ZNF143 GTRD no Epithelial (MCF-7) 108180122
chr16 11189668 11189683 FOXP1 JASPAR yes 9486091
chr16 11189668 11189689 IRF1 JASPAR yes 9486092
chr16 11189669 11189684 FOXP1 JASPAR yes 9486093
chr16 11189669 11189690 IRF1 JASPAR yes 9486094
chr16 11189670 11189685 FOXP1 JASPAR yes 9486095
chr16 11189670 11189691 IRF1 JASPAR yes 9486096
chr16 11189671 11189686 FOXP1 JASPAR yes 9486097
chr16 11189671 11189692 IRF1 JASPAR yes 9486098
chr16 11189672 11189687 FOXP1 JASPAR yes 9486099
chr16 11189672 11189693 IRF1 JASPAR yes 9486100
chr16 11189673 11189688 FOXP1 JASPAR yes 9486101
chr16 11189673 11189694 IRF1 JASPAR yes 9486102
chr16 11189674 11189689 FOXP1 JASPAR yes 9486103
chr16 11189674 11189695 IRF1 JASPAR yes 9486104
Genes associated with rs200554977[chr16:11189674], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More