EnhancerDB
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  3. rs200563180[chr14:56040212]
Enhancers that have rs200563180[chr14:56040212]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 56037325 56062723 enh3218
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Esophagus Astrocyte Liver Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs200563180[chr14:56040212]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 56040196 56040217 IRF1 JASPAR yes 115559661
chr14 56040198 56040213 STAT2 JASPAR yes 115559662
chr14 56040199 56040213 STAT1 JASPAR yes 115559663
chr14 56040201 56040222 IRF1 JASPAR yes 115559664
chr14 56040202 56040217 FOXP1 JASPAR yes 115559665
chr14 56040202 56040223 IRF1 JASPAR yes 115559666
chr14 56040203 56040218 STAT2 JASPAR yes 115559667
chr14 56040206 56040227 IRF1 JASPAR yes 115559668
chr14 56040207 56040222 FOXP1 JASPAR yes 115559669
chr14 56040207 56040228 IRF1 JASPAR yes 115559670
chr14 56040212 56040227 FOXP1 JASPAR yes 115559671
Genes associated with rs200563180[chr14:56040212], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More