EnhancerDB
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  3. rs200605193[chr17:55674691]
Enhancers that have rs200605193[chr17:55674691]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55673238 55692440 enh4492
Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs200605193[chr17:55674691]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55674687 55674696 NKX3-2 JASPAR yes 54973220
chr17 55674687 55674697 NKX2-3 JASPAR yes 54973221
chr17 55674688 55674696 ISL2 JASPAR yes 54973222
chr17 55674688 55674697 NKX2-8 JASPAR yes 54973223
Genes associated with rs200605193[chr17:55674691], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More