-
Home
- SNP
- rs200613816[chr16:28100701]
Enhancers that have rs200613816[chr16:28100701]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
28098765 |
28106942 |
enh16617 |
|
|
Transcript factors that have rs200613816[chr16:28100701]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
28100394
|
28101876
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21701328
|
|
|
chr16
|
28100684
|
28100704
|
RREB1
|
JASPAR
|
yes
|
|
10216622
|
|
|
chr16
|
28100687
|
28100707
|
RREB1
|
JASPAR
|
yes
|
|
10216623
|
|
|
chr16
|
28100693
|
28100713
|
RREB1
|
JASPAR
|
yes
|
|
10216624
|
|
|
chr16
|
28100695
|
28100715
|
RREB1
|
JASPAR
|
yes
|
|
10216625
|
|
|
chr16
|
28100696
|
28100711
|
RUNX2
|
JASPAR
|
yes
|
|
10216626
|
|
|
chr16
|
28100696
|
28101100
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21701329
|
|
|
chr16
|
28100697
|
28100717
|
RREB1
|
JASPAR
|
yes
|
|
10216627
|
|
|
chr16
|
28100698
|
28100712
|
PLAG1
|
JASPAR
|
yes
|
|
10216628
|
|
|
chr16
|
28100700
|
28100720
|
RREB1
|
JASPAR
|
yes
|
|
10216629
|
|
Genes associated with rs200613816[chr16:28100701], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |