EnhancerDB
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  3. rs2006788[chr2:25502552]
Enhancers that have rs2006788[chr2:25502552]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 25490985 25504661 enh18356
Brain (SK-N-SH) Blood (GM12878) Muscle (A673) Placenta Uterus Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Blood (T-cell)
Transcript factors that have rs2006788[chr2:25502552]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 25501880 25502669 IKZF1 UCSC Txn Factor no Conserved 108431372
chr2 25502545 25502566 IRF1 JASPAR yes 72461018
chr2 25502546 25502561 FOXP1 JASPAR yes 72461019
chr2 25502546 25502567 IRF1 JASPAR yes 72461020
chr2 25502547 25502558 FOXP2 JASPAR yes 72461021
chr2 25502547 25502559 FOXC2 JASPAR yes 72461022
chr2 25502547 25502562 STAT2 JASPAR yes 72461023
chr2 25502548 25502563 FOXP1 JASPAR yes 72461024
chr2 25502550 25502565 FOXP1 JASPAR yes 72461025
chr2 25502551 25502566 FOXP1 JASPAR yes 72461026
chr2 25502552 25502567 FOXP1 JASPAR yes 72461027
Genes associated with rs2006788[chr2:25502552], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More