EnhancerDB
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  3. rs200682251[chr6:17722601]
Enhancers that have rs200682251[chr6:17722601]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 17712332 17727615 enh23084
Bone Marrow (K562) Skin (Keratinocyte) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Muscle (A673) Placenta Colon (HCT116) Lung (PC-9) Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs200682251[chr6:17722601]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 17722588 17722609 IRF1 JASPAR yes 100397236
chr6 17722591 17722612 IRF1 JASPAR yes 100397237
chr6 17722592 17722613 IRF1 JASPAR yes 100397238
chr6 17722593 17722608 FOXP1 JASPAR yes 100397239
chr6 17722593 17722614 IRF1 JASPAR yes 100397240
chr6 17722594 17722609 FOXP1 JASPAR yes 100397241
chr6 17722594 17722615 IRF1 JASPAR yes 100397242
chr6 17722595 17722610 FOXP1 JASPAR yes 100397243
chr6 17722595 17722616 IRF1 JASPAR yes 100397244
chr6 17722596 17722611 FOXP1 JASPAR yes 100397245
chr6 17722596 17722617 IRF1 JASPAR yes 100397246
chr6 17722597 17722612 FOXP1 JASPAR yes 100397247
chr6 17722598 17722613 FOXP1 JASPAR yes 100397248
chr6 17722599 17722614 FOXP1 JASPAR yes 100397249
chr6 17722600 17722615 FOXP1 JASPAR yes 100397250
chr6 17722601 17722616 FOXP1 JASPAR yes 100397251
Genes associated with rs200682251[chr6:17722601], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More