EnhancerDB
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  3. rs200686945[chr16:384146]
Enhancers that have rs200686945[chr16:384146]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 364825 394775 enh16487
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs200686945[chr16:384146]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 380499 384534 ZNF143 GTRD no Epithelial (MCF-7) 21683891
chr16 380499 384534 ZNF143 GTRD no Epithelial (MCF-7) 108170287
chr16 380814 384507 ZNF274 GTRD no Blood (GM12878) 108170315
chr16 384141 384147 NFIC JASPAR yes 9105908
chr16 384143 384147 H1TF2 TRANSFAC yes 9105909
chr16 384143 384147 NFE TRANSFAC yes 9105910
chr16 384143 384147 SRF TRANSFAC yes 9105911
chr16 384143 384153 HOXB13 JASPAR yes 9105912
Genes associated with rs200686945[chr16:384146], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More