EnhancerDB
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  3. rs200706005[chr16:2175673]
Enhancers that have rs200706005[chr16:2175673]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 2169469 2181557 enh3844
Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Muscle (Myotube) Uterus Blood (T-cell) Heart
Transcript factors that have rs200706005[chr16:2175673]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 2172975 2176695 ZNF143 GTRD no Epithelial (MCF-7) 108172258
chr16 2173580 2176864 ZNF143 GTRD no Epithelial (MCF-7) 108172259
chr16 2174019 2176216 ZNF143 GTRD no Epithelial (MCF-7) 108172260
chr16 2174294 2182854 TCF7L2 GTRD no Colon (HCT116) 21684859
chr16 2174294 2182854 TCF7L2 GTRD no Colon (HCT116) 108172262
chr16 2174933 2175839 AR GTRD no Prostate (PC-3) 108172264
chr16 2174953 2176689 ZNF143 GTRD no Epithelial (MCF-7) 108172265
chr16 2175247 2176278 ZNF143 GTRD no Epithelial (MCF-7) 108172270
chr16 2175310 2175886 TCF7L2 GTRD no Colon (HCT116) 21684862
chr16 2175310 2175886 TCF7L2 GTRD no Colon (HCT116) 108172271
chr16 2175663 2175677 ZIC1 JASPAR yes 9171234
chr16 2175663 2175678 SCRT1 JASPAR yes 9171235
chr16 2175663 2175678 ZIC3 JASPAR yes 9171236
chr16 2175663 2175678 ZIC4 JASPAR yes 9171237
chr16 2175664 2175674 FIGLA JASPAR yes 9171238
chr16 2175664 2175674 TCF3 JASPAR yes 9171239
chr16 2175664 2175674 TCF4 JASPAR yes 9171240
chr16 2175665 2175674 SNAI2 JASPAR yes 9171241
chr16 2175665 2175678 SCRT2 JASPAR yes 9171242
Genes associated with rs200706005[chr16:2175673], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More