EnhancerDB
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  3. rs200728223[chr6:13374501]
Enhancers that have rs200728223[chr6:13374501]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13358871 13387475 enh8960
Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Blood (T-cell) Heart
Transcript factors that have rs200728223[chr6:13374501]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13374492 13374504 FOXC2 JASPAR yes 100022101
chr6 13374494 13374514 RREB1 JASPAR yes 100022102
chr6 13374495 13374515 RREB1 JASPAR yes 100022103
chr6 13374497 13374517 RREB1 JASPAR yes 100022104
chr6 13374499 13374519 RREB1 JASPAR yes 100022105
chr6 13374501 13374521 RREB1 JASPAR yes 100022106
Genes associated with rs200728223[chr6:13374501], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More