EnhancerDB
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  3. rs200731520[chr1:16232948]
Enhancers that have rs200731520[chr1:16232948]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16216545 16234615 enh82
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Thyroid Pancreas (Panc1) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Uterus Stomach
Transcript factors that have rs200731520[chr1:16232948]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16232930 16232951 ZNF263 JASPAR yes 27014138
chr1 16232931 16232952 IRF1 JASPAR yes 27014139
chr1 16232933 16232954 IRF1 JASPAR yes 27014140
chr1 16232937 16232958 IRF1 JASPAR yes 27014141
chr1 16232938 16232959 IRF1 JASPAR yes 27014142
chr1 16232939 16232954 PRDM1 JASPAR yes 27014143
chr1 16232939 16232954 STAT2 JASPAR yes 27014144
chr1 16232940 16232954 SPIC JASPAR yes 27014145
chr1 16232940 16232954 STAT1 JASPAR yes 27014146
chr1 16232941 16232955 SPIC JASPAR yes 27014147
chr1 16232942 16232963 IRF1 JASPAR yes 27014148
chr1 16232943 16232964 IRF1 JASPAR yes 27014149
chr1 16232944 16232949 ETS2 TRANSFAC yes 27014150
chr1 16232944 16232965 IRF1 JASPAR yes 27014151
chr1 16232945 16232966 IRF1 JASPAR yes 27014152
chr1 16232946 16232961 FOXP1 JASPAR yes 27014153
chr1 16232946 16232967 IRF1 JASPAR yes 27014154
chr1 16232947 16232962 FOXP1 JASPAR yes 27014155
chr1 16232947 16232968 IRF1 JASPAR yes 27014156
chr1 16232948 16232963 FOXP1 JASPAR yes 27014157
chr1 16232948 16232969 IRF1 JASPAR yes 27014158
Genes associated with rs200731520[chr1:16232948], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More