EnhancerDB
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  3. rs200746220[chr1:172451571]
Enhancers that have rs200746220[chr1:172451571]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172440585 172461255 enh12372
Skin (Keratinocyte) Prostate (PC-3) Stomach Placenta Lung (PC-9) Epithelial (MCF-7)
Transcript factors that have rs200746220[chr1:172451571]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172448247 172451908 ZNF143 GTRD no Epithelial (MCF-7) 21349936
chr1 172448454 172451937 ZNF143 GTRD no Epithelial (MCF-7) 21349937
chr1 172448542 172451635 ZNF143 GTRD no Epithelial (MCF-7) 21349940
chr1 172448543 172451637 ZNF143 GTRD no Epithelial (MCF-7) 21349941
chr1 172448607 172451866 ZNF143 GTRD no Epithelial (MCF-7) 21349947
chr1 172448666 172451876 ZNF143 GTRD no Epithelial (MCF-7) 21349951
chr1 172450298 172451797 ZNF143 GTRD no Epithelial (MCF-7) 21349989
chr1 172450380 172451812 ZNF143 GTRD no Epithelial (MCF-7) 21349990
chr1 172450422 172451571 ZNF143 GTRD no Epithelial (MCF-7) 21349993
chr1 172450435 172451629 ZNF143 GTRD no Epithelial (MCF-7) 21349994
chr1 172450442 172451654 ZNF143 GTRD no Epithelial (MCF-7) 21349995
chr1 172450937 172451605 ZNF143 GTRD no Epithelial (MCF-7) 21350003
chr1 172451007 172451649 ZNF143 GTRD no Epithelial (MCF-7) 21350004
chr1 172451020 172451622 ZNF143 GTRD no Epithelial (MCF-7) 21350005
chr1 172451032 172451789 ZNF143 GTRD no Epithelial (MCF-7) 21350007
chr1 172451078 172451597 ZNF143 GTRD no Epithelial (MCF-7) 21350009
chr1 172451133 172451586 ZNF143 GTRD no Epithelial (MCF-7) 21350010
chr1 172451218 172451584 ZNF143 GTRD no Epithelial (MCF-7) 21350012
chr1 172451550 172451571 IRF1 JASPAR yes 33131802
chr1 172451555 172451576 IRF1 JASPAR yes 33131807
chr1 172451556 172451571 FOXP1 JASPAR yes 33131809
chr1 172451556 172451577 IRF1 JASPAR yes 33131810
chr1 172451557 172451572 STAT2 JASPAR yes 33131813
chr1 172451557 172451578 IRF1 JASPAR yes 33131814
chr1 172451558 172451573 FOXP1 JASPAR yes 33131815
chr1 172451558 172451578 RREB1 JASPAR yes 33131816
chr1 172451558 172451579 IRF1 JASPAR yes 33131817
chr1 172451560 172451575 FOXP1 JASPAR yes 33131818
chr1 172451561 172451576 FOXP1 JASPAR yes 33131819
chr1 172451562 172451577 FOXP1 JASPAR yes 33131820
chr1 172451563 172451578 FOXP1 JASPAR yes 33131821
chr1 172451563 172451583 RREB1 JASPAR yes 33131822
chr1 172451563 172451584 IRF1 JASPAR yes 33131823
chr1 172451564 172451585 IRF1 JASPAR yes 33131824
chr1 172451565 172451580 FOXP1 JASPAR yes 33131825
chr1 172451569 172451590 IRF1 JASPAR yes 33131826
chr1 172451570 172451576 TCF4 TRANSFAC yes 33131827
chr1 172451570 172451585 FOXP1 JASPAR yes 33131828
chr1 172451571 172451582 FOXP2 JASPAR yes 33131829
chr1 172451571 172451583 FOXC2 JASPAR yes 33131830
chr1 172451571 172451586 STAT2 JASPAR yes 33131831
Genes associated with rs200746220[chr1:172451571], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More