EnhancerDB
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  3. rs200750925[chr12:53355676]
Enhancers that have rs200750925[chr12:53355676]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53348905 53377069 enh14737
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Bone (Osteoblast) Lung (A549) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs200750925[chr12:53355676]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53354677 53356506 TCF7L2 GTRD no Colon (HCT116) 21548269
chr12 53354777 53355998 ZNF274 GTRD no Bone Marrow (K562) 21548270
chr12 53354813 53355842 ZNF274 GTRD no Bone Marrow (K562) 21548271
chr12 53354913 53356108 ZNF274 GTRD no Bone Marrow (K562) 21548272
chr12 53354917 53356295 ZNF274 GTRD no Bone Marrow (K562) 21548273
chr12 53354938 53355700 ZNF274 GTRD no Bone Marrow (K562) 21548274
chr12 53354941 53356307 ZNF274 GTRD no Bone Marrow (K562) 21548276
chr12 53355042 53356222 ZNF274 GTRD no Bone Marrow (K562) 21548282
chr12 53355056 53356209 ZNF274 GTRD no Bone Marrow (K562) 21548284
chr12 53355076 53355722 ZNF274 GTRD no Bone Marrow (K562) 21548286
chr12 53355101 53356040 ZNF274 GTRD no Bone Marrow (K562) 21548291
chr12 53355369 53355791 ZNF274 GTRD no Bone Marrow (K562) 21548299
chr12 53355401 53356078 TCF7L2 GTRD no Colon (HCT116) 21548300
chr12 53355661 53355681 RREB1 JASPAR yes 120966763
chr12 53355662 53355682 RREB1 JASPAR yes 120966765
chr12 53355663 53355683 RREB1 JASPAR yes 120966766
chr12 53355664 53355684 RREB1 JASPAR yes 120966767
chr12 53355673 53355687 E2F7 JASPAR yes 120966768
chr12 53355674 53355684 ZNF740 JASPAR yes 120966769
chr12 53355675 53355685 ZNF740 JASPAR yes 120966770
Genes associated with rs200750925[chr12:53355676], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More