EnhancerDB
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  3. rs200809019[chr1:28777323]
Enhancers that have rs200809019[chr1:28777323]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 28772305 28780210 enh26592
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Muscle (A673) Peripheral Blood (MM.1S) Lung (PC-9) Thymus Stomach
Transcript factors that have rs200809019[chr1:28777323]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 28777305 28777325 RREB1 JASPAR yes 27772593
chr1 28777312 28777332 RREB1 JASPAR yes 27772597
chr1 28777312 28777333 IRF1 JASPAR yes 27772598
chr1 28777317 28777329 IRF1 JASPAR yes 27772599
chr1 28777317 28777331 IRF7 JASPAR yes 27772600
chr1 28777317 28777332 IRF9 JASPAR yes 27772601
chr1 28777317 28777337 RREB1 JASPAR yes 27772602
chr1 28777318 28777339 IRF1 JASPAR yes 27772603
chr1 28777322 28777334 IRF1 JASPAR yes 27772604
Genes associated with rs200809019[chr1:28777323], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More