EnhancerDB
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  3. rs200828536[chr19:7474658]
Enhancers that have rs200828536[chr19:7474658]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 7469445 7495915 enh17893
Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs200828536[chr19:7474658]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 7474638 7474659 IRF1 JASPAR yes 112324831
chr19 7474640 7474661 IRF1 JASPAR yes 112324832
chr19 7474644 7474665 IRF1 JASPAR yes 112324833
chr19 7474646 7474661 PRDM1 JASPAR yes 112324834
chr19 7474646 7474661 STAT2 JASPAR yes 112324835
chr19 7474647 7474661 SPIC JASPAR yes 112324836
chr19 7474647 7474661 STAT1 JASPAR yes 112324837
chr19 7474648 7474669 IRF1 JASPAR yes 112324838
chr19 7474649 7474664 FOXP1 JASPAR yes 112324839
chr19 7474649 7474670 IRF1 JASPAR yes 112324840
chr19 7474650 7474671 IRF1 JASPAR yes 112324841
chr19 7474651 7474666 FOXP1 JASPAR yes 112324842
chr19 7474651 7474672 IRF1 JASPAR yes 112324843
chr19 7474652 7474673 IRF1 JASPAR yes 112324844
chr19 7474653 7474668 FOXP1 JASPAR yes 112324845
chr19 7474653 7474674 IRF1 JASPAR yes 112324846
chr19 7474654 7474669 FOXP1 JASPAR yes 112324847
chr19 7474655 7474670 FOXP1 JASPAR yes 112324848
chr19 7474656 7474671 FOXP1 JASPAR yes 112324849
chr19 7474657 7474672 FOXP1 JASPAR yes 112324850
chr19 7474658 7474673 FOXP1 JASPAR yes 112324851
Genes associated with rs200828536[chr19:7474658], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More