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- rs200874539[chr16:28100802]
Enhancers that have rs200874539[chr16:28100802]
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| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr16 |
28098765 |
28106942 |
enh16617 |
|
|
Transcript factors that have rs200874539[chr16:28100802]
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| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr16
|
28100394
|
28101876
|
ZNF143
|
GTRD
|
no
|
Epithelial (MCF-7)
|
21701328
|
|
|
chr16
|
28100696
|
28101100
|
TCF7L2
|
GTRD
|
no
|
Colon (HCT116)
|
21701329
|
|
|
chr16
|
28100785
|
28100805
|
RREB1
|
JASPAR
|
yes
|
|
10216666
|
|
|
chr16
|
28100787
|
28100807
|
RREB1
|
JASPAR
|
yes
|
|
10216667
|
|
|
chr16
|
28100788
|
28100803
|
RUNX2
|
JASPAR
|
yes
|
|
10216668
|
|
|
chr16
|
28100789
|
28100809
|
RREB1
|
JASPAR
|
yes
|
|
10216669
|
|
|
chr16
|
28100796
|
28100816
|
RREB1
|
JASPAR
|
yes
|
|
10216670
|
|
|
chr16
|
28100797
|
28100812
|
RUNX2
|
JASPAR
|
yes
|
|
10216671
|
|
Genes associated with rs200874539[chr16:28100802], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |