EnhancerDB
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Enhancers that have rs200943192[chr19:12905242]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 12880762 12907555 enh5013
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Astrocyte Bone (Osteoblast) Lung Blood (OCI-LY7) Placenta Blood (Karpas-422) Muscle (Myoblast) Uterus Blood (T-cell)
Transcript factors that have rs200943192[chr19:12905242]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 12899245 12906365 POLR2A UCSC Txn Factor no Conserved 108386458
chr19 12899245 12906365 POLR2A UCSC Txn Factor no Conserved 108386459
chr19 12905226 12905247 IRF1 JASPAR yes 112494968
chr19 12905228 12905248 RREB1 JASPAR yes 112494969
chr19 12905231 12905243 IRF1 JASPAR yes 112494970
chr19 12905233 12905253 RREB1 JASPAR yes 112494971
chr19 12905235 12905250 FOXP1 JASPAR yes 112494972
chr19 12905236 12905247 FOXA1 JASPAR yes 112494973
chr19 12905236 12905251 FOXA1 JASPAR yes 112494974
chr19 12905237 12905249 FOXC2 JASPAR yes 112494975
chr19 12905238 12905250 FOXI1 JASPAR yes 112494976
chr19 12905238 12905258 RREB1 JASPAR yes 112494977
chr19 12905242 12905257 FOXP1 JASPAR yes 112494978
chr19 12905242 12905262 RREB1 JASPAR yes 112494979
chr19 12905242 12905263 IRF1 JASPAR yes 112494980
Genes associated with rs200943192[chr19:12905242], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More