EnhancerDB
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  3. rs200952822[chr17:55685197]
Enhancers that have rs200952822[chr17:55685197]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55673238 55692440 enh4492
Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs200952822[chr17:55685197]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55685196 55685216 TP63 JASPAR yes 54974807
chr17 55685197 55685206 SNAI2 JASPAR yes 54974808
chr17 55685197 55685207 ID4 JASPAR yes 54974809
chr17 55685197 55685207 TCF3 JASPAR yes 54974810
chr17 55685197 55685207 TCF4 JASPAR yes 54974811
Genes associated with rs200952822[chr17:55685197], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More