EnhancerDB
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  3. rs201079973[chr1:90407598]
Enhancers that have rs201079973[chr1:90407598]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 90404665 90425035 enh485
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (GM12878) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs201079973[chr1:90407598]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 90407579 90407600 IRF1 JASPAR yes 30636450
chr1 90407583 90407598 FOXP1 JASPAR yes 30636455
chr1 90407585 90407600 FOXP1 JASPAR yes 30636456
chr1 90407585 90407600 MEF2C JASPAR yes 30636457
chr1 90407585 90407606 IRF1 JASPAR yes 30636458
chr1 90407586 90407601 FOXP1 JASPAR yes 30636459
chr1 90407586 90407607 IRF1 JASPAR yes 30636460
chr1 90407587 90407602 FOXP1 JASPAR yes 30636461
chr1 90407591 90407612 IRF1 JASPAR yes 30636463
chr1 90407595 90407610 PRDM1 JASPAR yes 30636464
Genes associated with rs201079973[chr1:90407598], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More