EnhancerDB
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  3. rs201136336[chr1:172869055]
Enhancers that have rs201136336[chr1:172869055]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs201136336[chr1:172869055]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172869035 172869055 RREB1 JASPAR yes 33163201
chr1 172869038 172869058 RREB1 JASPAR yes 33163205
chr1 172869039 172869059 RREB1 JASPAR yes 33163206
chr1 172869043 172869063 RREB1 JASPAR yes 33163208
chr1 172869045 172869060 FOXA1 JASPAR yes 33163209
chr1 172869045 172869065 RREB1 JASPAR yes 33163210
chr1 172869046 172869058 FOXI1 JASPAR yes 33163211
chr1 172869046 172869061 FOXP1 JASPAR yes 33163212
chr1 172869047 172869059 FOXC2 JASPAR yes 33163213
chr1 172869049 172869060 FOXA1 JASPAR yes 33163214
chr1 172869050 172869065 FOXP1 JASPAR yes 33163215
chr1 172869050 172869070 RREB1 JASPAR yes 33163216
chr1 172869050 172869071 IRF1 JASPAR yes 33163217
chr1 172869055 172869075 RREB1 JASPAR yes 33163218
Genes associated with rs201136336[chr1:172869055], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More