EnhancerDB
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  3. rs201260203[chr16:88344180]
Enhancers that have rs201260203[chr16:88344180]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 88327201 88357367 enh16902
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Placenta Muscle (Myoblast) Pancreas Spleen Muscle (Myotube) Uterus
Transcript factors that have rs201260203[chr16:88344180]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 88344163 88344184 IRF1 JASPAR yes 12276930
chr16 88344164 88344185 IRF1 JASPAR yes 12276932
chr16 88344168 88344183 FOXP1 JASPAR yes 12276935
chr16 88344169 88344184 FOXP1 JASPAR yes 12276936
chr16 88344170 88344185 FOXP1 JASPAR yes 12276937
chr16 88344172 88344187 FOXP1 JASPAR yes 12276938
chr16 88344174 88344189 FOXP1 JASPAR yes 12276939
chr16 88344177 88344187 HOXD13 JASPAR yes 12276940
chr16 88344177 88344188 HOXA10 JASPAR yes 12276941
chr16 88344179 88344193 ONECUT2 JASPAR yes 12276942
chr16 88344179 88344193 ONECUT3 JASPAR yes 12276943
Genes associated with rs201260203[chr16:88344180], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More