EnhancerDB
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  3. rs2012862[chr1:175201727]
Enhancers that have rs2012862[chr1:175201727]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 175184751 175208860 enh747
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Blood (OCI-LY7) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Breast Spleen Heart
Transcript factors that have rs2012862[chr1:175201727]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 175201716 175201734 RARA JASPAR yes 33276612
chr1 175201717 175201735 ESR2 JASPAR yes 33276614
chr1 175201719 175201734 HNF4A JASPAR yes 33276615
chr1 175201720 175201734 RXRB JASPAR yes 33276616
chr1 175201720 175201734 RXRG JASPAR yes 33276617
chr1 175201720 175201735 HNF4G JASPAR yes 33276618
chr1 175201720 175201735 LEF1 JASPAR yes 33276619
chr1 175201720 175201735 NR2C2 JASPAR yes 33276620
chr1 175201727 175201735 CREB1 JASPAR yes 33276621
chr1 175201727 175201737 RORA JASPAR yes 33276622
Genes associated with rs2012862[chr1:175201727], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More