EnhancerDB
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  3. rs201372606[chr5:171866297]
Enhancers that have rs201372606[chr5:171866297]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171850545 171880495 enh22807
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs201372606[chr5:171866297]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171866280 171866301 IRF1 JASPAR yes 67790268
chr5 171866281 171866301 RREB1 JASPAR yes 67790269
chr5 171866282 171866297 IRF9 JASPAR yes 67790270
chr5 171866290 171866310 RREB1 JASPAR yes 67790271
chr5 171866293 171866313 RREB1 JASPAR yes 67790272
chr5 171866294 171866314 RREB1 JASPAR yes 67790273
chr5 171866295 171866315 RREB1 JASPAR yes 67790274
Genes associated with rs201372606[chr5:171866297], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More