EnhancerDB
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  3. rs201442497[chr1:12670079]
Enhancers that have rs201442497[chr1:12670079]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 12643625 12676355 enh11516
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Lung Heart
Transcript factors that have rs201442497[chr1:12670079]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 12670077 12670092 FOXA1 JASPAR yes 26838999
chr1 12670078 12670090 FOXI1 JASPAR yes 26839000
chr1 12670078 12670092 POU4F1 JASPAR yes 26839001
chr1 12670078 12670093 FOXP1 JASPAR yes 26839002
chr1 12670078 12670093 HNF1A JASPAR yes 26839003
chr1 12670079 12670091 FOXC2 JASPAR yes 26839004
chr1 12670079 12670093 ONECUT2 JASPAR yes 26839005
chr1 12670079 12670093 ONECUT3 JASPAR yes 26839006
Genes associated with rs201442497[chr1:12670079], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More