EnhancerDB
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  3. rs201513427[chr6:41506542]
Enhancers that have rs201513427[chr6:41506542]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 41483885 41508635 enh38996
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Blood (T-cell) Astrocyte Stomach Muscle (A673) Thyroid Breast Lung (PC-9) Pancreas Uterus Thymus Epithelial (MCF-7)
chr6 41506487 41506686 vista51919
VISTA
Transcript factors that have rs201513427[chr6:41506542]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 41506429 41506689 CEBPB UCSC Txn Factor no Conserved 108540178
chr6 41506436 41506716 JUND UCSC Txn Factor no Conserved 108540179
chr6 41506533 41506548 SCRT1 JASPAR yes 70362770
chr6 41506533 41506548 SCRT1 JASPAR yes 101656532
chr6 41506541 41506555 IRF8 JASPAR yes 70362771
chr6 41506541 41506555 IRF8 JASPAR yes 101656533
chr6 41506542 41506547 GATA1 TRANSFAC yes 70362772
chr6 41506542 41506547 GATA1 TRANSFAC yes 101656534
Genes associated with rs201513427[chr6:41506542], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More