EnhancerDB
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  3. rs201527596[chr17:39830254]
Enhancers that have rs201527596[chr17:39830254]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39816776 39838995 enh4409
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Lung (PC-9) Blood (GM12878) Placenta Colon (HCT116) Uterus Thyroid Blood (Karpas-422) Peripheral Blood (MM.1S) Pancreas Neural Stem Cells (H9) Thymus
Transcript factors that have rs201527596[chr17:39830254]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39830234 39830254 RREB1 JASPAR yes 54271710
chr17 39830234 39830255 IRF1 JASPAR yes 54271711
chr17 39830235 39830256 IRF1 JASPAR yes 54271714
chr17 39830240 39830260 RREB1 JASPAR yes 54271718
chr17 39830240 39830261 IRF1 JASPAR yes 54271719
chr17 39830241 39830256 FOXP1 JASPAR yes 54271721
chr17 39830241 39830262 IRF1 JASPAR yes 54271722
chr17 39830242 39830257 STAT2 JASPAR yes 54271723
chr17 39830245 39830257 IRF1 JASPAR yes 54271724
chr17 39830245 39830259 IRF7 JASPAR yes 54271725
chr17 39830247 39830262 FOXP1 JASPAR yes 54271727
chr17 39830253 39830259 TCF4 TRANSFAC yes 54271728
Genes associated with rs201527596[chr17:39830254], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More