EnhancerDB
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  3. rs201539933[chr12:96622194]
Enhancers that have rs201539933[chr12:96622194]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 96582645 96638775 enh14921
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs201539933[chr12:96622194]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 96622189 96622204 MEF2C JASPAR yes 123050212
chr12 96622192 96622207 FOXP1 JASPAR yes 123050213
chr12 96622193 96622208 FOXP1 JASPAR yes 123050214
chr12 96622193 96622214 IRF1 JASPAR yes 123050215
chr12 96622194 96622209 FOXP1 JASPAR yes 123050216
chr12 96622194 96622215 IRF1 JASPAR yes 123050217
Genes associated with rs201539933[chr12:96622194], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More