EnhancerDB
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  3. rs201549938[chr17:70389133]
Enhancers that have rs201549938[chr17:70389133]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 70352230 70433435 enh4580
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs201549938[chr17:70389133]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 70388777 70389133 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784477
chr17 70388830 70389160 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21784481
chr17 70388936 70389176 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784486
chr17 70388938 70389214 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21784487
chr17 70389133 70389152 REST JASPAR yes 55782213
Genes associated with rs201549938[chr17:70389133], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More