EnhancerDB
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  3. rs201550059[chr15:99973163]
Enhancers that have rs201550059[chr15:99973163]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 99971645 99998102 enh16467
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs201550059[chr15:99973163]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 99972905 99973691 ZNF143 GTRD no Epithelial (MCF-7) 21681990
chr15 99972905 99973691 ZNF143 GTRD no Epithelial (MCF-7) 108168385
chr15 99972997 99973562 ZNF143 GTRD no Epithelial (MCF-7) 21681991
chr15 99973011 99973461 ZNF143 GTRD no Epithelial (MCF-7) 21681992
chr15 99973155 99973169 PLAG1 JASPAR yes 25872616
chr15 99973163 99973177 PLAG1 JASPAR yes 25872617
Genes associated with rs201550059[chr15:99973163], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More