EnhancerDB
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  3. rs201590001[chr5:95170399]
Enhancers that have rs201590001[chr5:95170399]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 95166465 95182255 enh8570
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Blood (T-cell) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Breast Pancreas (Panc1) Uterus Thymus Epithelial (MCF-7)
chr5 95170246 95170624 vista48505
VISTA
Transcript factors that have rs201590001[chr5:95170399]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 95170253 95171017 POLR2A UCSC Txn Factor no Conserved 108535781
chr5 95170253 95171017 POLR2A UCSC Txn Factor no Conserved 108535782
chr5 95170381 95170402 IRF1 JASPAR yes 64383823
chr5 95170381 95170402 IRF1 JASPAR yes 70685070
chr5 95170384 95170405 IRF1 JASPAR yes 64383825
chr5 95170384 95170405 IRF1 JASPAR yes 70685072
chr5 95170385 95170400 FOXP1 JASPAR yes 64383826
chr5 95170385 95170400 FOXP1 JASPAR yes 70685073
chr5 95170385 95170406 IRF1 JASPAR yes 64383827
chr5 95170385 95170406 IRF1 JASPAR yes 70685074
chr5 95170386 95170401 FOXP1 JASPAR yes 64383828
chr5 95170386 95170401 FOXP1 JASPAR yes 70685075
chr5 95170386 95170407 IRF1 JASPAR yes 64383829
chr5 95170386 95170407 IRF1 JASPAR yes 70685076
chr5 95170387 95170402 FOXP1 JASPAR yes 64383830
chr5 95170387 95170402 FOXP1 JASPAR yes 70685077
chr5 95170388 95170403 FOXP1 JASPAR yes 64383831
chr5 95170388 95170403 FOXP1 JASPAR yes 70685078
chr5 95170389 95170404 FOXP1 JASPAR yes 64383832
chr5 95170389 95170404 FOXP1 JASPAR yes 70685079
chr5 95170390 95170405 FOXP1 JASPAR yes 64383833
chr5 95170390 95170405 FOXP1 JASPAR yes 70685080
chr5 95170391 95170406 FOXP1 JASPAR yes 64383834
chr5 95170391 95170406 FOXP1 JASPAR yes 70685081
chr5 95170392 95170407 FOXP1 JASPAR yes 64383835
chr5 95170392 95170407 FOXP1 JASPAR yes 70685082
chr5 95170399 95170414 MEF2C JASPAR yes 64383836
chr5 95170399 95170414 MEF2C JASPAR yes 70685083
Genes associated with rs201590001[chr5:95170399], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More