EnhancerDB
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  3. rs201679798[chr1:227952605]
Enhancers that have rs201679798[chr1:227952605]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 227936025 227954000 enh47302
Bone Marrow (K562) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Lung (PC-9) Breast Muscle (Myoblast) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs201679798[chr1:227952605]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 227952275 227954257 TCF7L2 GTRD no Colon (HCT116) 107876646
chr1 227952602 227952617 FOXP1 JASPAR yes 35886613
chr1 227952603 227952614 FOXA1 JASPAR yes 35886614
chr1 227952603 227952618 FOXA1 JASPAR yes 35886615
chr1 227952603 227952624 IRF1 JASPAR yes 35886616
chr1 227952604 227952616 FOXC2 JASPAR yes 35886617
chr1 227952604 227952624 RREB1 JASPAR yes 35886618
chr1 227952605 227952617 FOXI1 JASPAR yes 35886619
chr1 227952605 227952625 RREB1 JASPAR yes 35886620
Genes associated with rs201679798[chr1:227952605], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More