EnhancerDB
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  3. rs201715049[chr16:28199992]
Enhancers that have rs201715049[chr16:28199992]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 28190945 28218035 enh3961
Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Thymus Epithelial (MCF-7)
Transcript factors that have rs201715049[chr16:28199992]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 28199990 28200005 FOXP1 JASPAR yes 10220665
chr16 28199991 28200006 FOXP1 JASPAR yes 10220666
chr16 28199991 28200012 IRF1 JASPAR yes 10220667
chr16 28199992 28200007 FOXP1 JASPAR yes 10220668
chr16 28199992 28200013 IRF1 JASPAR yes 10220669
Genes associated with rs201715049[chr16:28199992], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More