EnhancerDB
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  3. rs201720094[chr12:125112539]
Enhancers that have rs201720094[chr12:125112539]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125108500 125127069 enh15092
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs201720094[chr12:125112539]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125112519 125112540 IRF1 JASPAR yes 124400986
chr12 125112523 125112544 IRF1 JASPAR yes 124400989
chr12 125112524 125112539 FOXP1 JASPAR yes 124400990
chr12 125112524 125112545 IRF1 JASPAR yes 124400991
chr12 125112525 125112546 IRF1 JASPAR yes 124400992
chr12 125112527 125112548 IRF1 JASPAR yes 124400993
chr12 125112529 125112544 FOXP1 JASPAR yes 124400994
chr12 125112529 125112550 IRF1 JASPAR yes 124400995
chr12 125112530 125112545 FOXP1 JASPAR yes 124400996
chr12 125112531 125112552 IRF1 JASPAR yes 124400997
chr12 125112532 125112547 FOXP1 JASPAR yes 124400998
chr12 125112533 125112554 IRF1 JASPAR yes 124400999
chr12 125112535 125112556 IRF1 JASPAR yes 124401000
chr12 125112537 125112552 FOXP1 JASPAR yes 124401001
chr12 125112538 125112553 FOXP1 JASPAR yes 124401002
chr12 125112539 125112560 IRF1 JASPAR yes 124401003
Genes associated with rs201720094[chr12:125112539], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More