EnhancerDB
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  3. rs201759275[chr1:118208503]
Enhancers that have rs201759275[chr1:118208503]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 118194385 118210705 enh589
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Blood (OCI-LY7) Blood (GM12878) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Thymus Epithelial (MCF-7)
Transcript factors that have rs201759275[chr1:118208503]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 118208144 118208600 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21334757
chr1 118208171 118208541 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21334758
chr1 118208238 118208562 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21334759
chr1 118208275 118208555 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21334760
chr1 118208332 118210438 P63 GTRD no Skin (Keratinocyte) 21334761
chr1 118208332 118210438 P63 GTRD no Skin (Keratinocyte) 107825460
chr1 118208425 118210419 P63 GTRD no Skin (Keratinocyte) 21334762
chr1 118208425 118210419 P63 GTRD no Skin (Keratinocyte) 107825461
chr1 118208503 118208510 NKX3-1 JASPAR yes 31891221
Genes associated with rs201759275[chr1:118208503], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More