EnhancerDB
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Enhancers that have rs201780223[chr1:109133145]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 109131125 109141135 enh27056
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Lung Stomach Muscle (A673) Muscle (Myoblast) Spleen Uterus Thymus Heart
chr1 109133120 109133338 vista2827
VISTA
Transcript factors that have rs201780223[chr1:109133145]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 109131449 109133620 ZNF274 GTRD no Bone Marrow (K562) 107818701
chr1 109132937 109133651 ZNF274 GTRD no Bone Marrow (K562) 107818702
chr1 109132937 109133651 ZNF274 GTRD no Bone Marrow (K562) 107818703
chr1 109132997 109133506 ZNF274 GTRD no Bone Marrow (K562) 107818704
chr1 109133029 109133368 ZNF274 GTRD no Liver (HepG2) 107818705
chr1 109133133 109133149 POU4F3 JASPAR yes 31395845
chr1 109133133 109133149 POU4F3 JASPAR yes 118345847
chr1 109133138 109133148 PAX7 JASPAR yes 31395846
chr1 109133138 109133148 PAX7 JASPAR yes 118345848
chr1 109133143 109133147 YY1 TRANSFAC yes 31395847
chr1 109133143 109133147 YY1 TRANSFAC yes 118345849
Genes associated with rs201780223[chr1:109133145], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More