EnhancerDB
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  3. rs202018949[chr17:76932500]
Enhancers that have rs202018949[chr17:76932500]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 76924065 76939144 enh17419
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs202018949[chr17:76932500]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 76931463 76933661 TCF7L2 GTRD no Colon (HCT116) 21795410
chr17 76931854 76932514 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21795413
chr17 76932171 76933233 TCF7L2 GTRD no Colon (HCT116) 21795421
chr17 76932268 76933584 TCF7L2 GTRD no Colon (HCT116) 21795424
chr17 76932275 76933649 TCF7L2 GTRD no Colon (HCT116) 21795425
chr17 76932317 76933286 TCF7L2 GTRD no Colon (HCT116) 21795426
chr17 76932368 76932987 TCF7L2 GTRD no Colon (HCT116) 21795427
chr17 76932398 76932939 TCF7L2 GTRD no Colon (HCT116) 21795428
chr17 76932485 76932927 ZNF143 GTRD no Epithelial (MCF-7) 21795429
chr17 76932499 76932514 FOXP1 JASPAR yes 56190505
chr17 76932500 76932515 FOXP1 JASPAR yes 56190506
Genes associated with rs202018949[chr17:76932500], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More