EnhancerDB
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Enhancers that have rs2020407[chr16:29623593]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29603958 29628535 enh3968
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs2020407[chr16:29623593]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29623587 29623597 SP1 JASPAR yes 10268877
chr16 29623589 29623594 SP1 TRANSFAC yes 10268878
chr16 29623590 29623595 SP1 TRANSFAC yes 10268879
chr16 29623590 29623596 SP1 TRANSFAC yes 10268880
Genes associated with rs2020407[chr16:29623593], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr16 29674600 29710020 + QPRT ENSG00000103485.13 29674600 51007 Uterus 0.289349 14707