EnhancerDB
  1. Home
  2. SNP
  3. rs202068001[chr1:9620964]
Enhancers that have rs202068001[chr1:9620964]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9595905 9627275 enh49
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Blood (T-cell) Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Bone (Osteoblast) Blood (OCI-LY7) Thyroid Thymus Cervix (HeLa-S3) Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs202068001[chr1:9620964]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9620962 9620966 YY1 TRANSFAC yes 26662243
chr1 9620963 9620973 NFATC3 JASPAR yes 26662244
chr1 9620964 9620971 NFATC2 JASPAR yes 26662245
chr1 9620964 9620975 STAT3 JASPAR yes 26662246
Genes associated with rs202068001[chr1:9620964], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More