EnhancerDB
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  3. rs202084172[chr1:172861484]
Enhancers that have rs202084172[chr1:172861484]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172860479 172890491 enh12377
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (A549) Stomach Muscle (A673) Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Thymus Epithelial (MCF-7)
Transcript factors that have rs202084172[chr1:172861484]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172861467 172861487 RREB1 JASPAR yes 33161929
chr1 172861472 172861493 ZNF263 JASPAR yes 33161930
chr1 172861474 172861494 RREB1 JASPAR yes 33161931
chr1 172861475 172861489 GLIS2 JASPAR yes 33161932
chr1 172861475 172861496 ZNF263 JASPAR yes 33161933
chr1 172861478 172861484 SP1 TRANSFAC yes 33161935
chr1 172861478 172861488 SP1 JASPAR yes 33161936
chr1 172861479 172861489 ZNF740 JASPAR yes 33161937
chr1 172861483 172861493 SP1 JASPAR yes 33161938
chr1 172861484 172861494 SP1 JASPAR yes 33161939
Genes associated with rs202084172[chr1:172861484], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More